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Series GSE41408 Query DataSets for GSE41408
Status Public on Feb 11, 2013
Title Co-expression of genes with ERG in prostate cancers
Organism Homo sapiens
Experiment type Expression profiling by array
Summary ERG overexpression is the most frequent molecular alteration in prostate cancer. We analyzed different stages of prostate cancer to identify genes that were coexpressed with ERG overexpression. In primary prostate tumors, it was shown that TDRD1 expression was the strongest correlated gene with ERG overexpression and we suggest TDRD1 as a direct ERG target gene.
 
Overall design 48 Prostate cancer samples from radical prostatectomies were included in this study. These samples contained more than 70% cancer and less than 30% stromal tissue. Each sample was analyzed once.
 
Contributor(s) Boormans JL, Trapman J, Jenster G
Citation(s) 23319146
Submission date Oct 09, 2012
Last update date Feb 18, 2019
Contact name Guido Jenster
E-mail(s) g.jenster@erasmusmc.nl
Phone 31107043672
Organization name Erasmus MC
Department Urology
Lab JNI, Be362a
Street address P.O. Box 2040
City Rotterdam
ZIP/Postal code 3000CA
Country Netherlands
 
Platforms (1)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
Samples (48)
GSM1016539 Prostate_Cancer [G004]
GSM1016540 Prostate_Cancer [G006]
GSM1016541 Prostate_Cancer [G007]
This SubSeries is part of SuperSeries:
GSE41410 Co-expression of genes with ERG in prostate cancers and cell lines
Relations
BioProject PRJNA177575

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE41408_RAW.tar 1.0 Gb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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