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| Status |
Public on Oct 13, 2012 |
| Title |
comprehensive chromatin interaction in TNF alpha stimulated HUVECs |
| Organism |
Homo sapiens |
| Experiment type |
Other
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| Summary |
HUVECs were stimulated and samples were prepared after 0 and 30 min. Chromatin interaction mediated by active RNA polymerase II was detected by ChIA-PET.
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| Overall design |
Samples were made afrer 0 and 30 min after TNF alpha stimulation.
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| Contributor(s) |
Kohro T, Ruan Y, Wada Y, Pho H, Kobayashi M, Li G, Tsutsumi S, Ruan X |
| Citation(s) |
23103767, 24797675 |
| Submission date |
Oct 12, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Takahide Kohro |
| E-mail(s) |
kohro@lsbm.org
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| Phone |
81-3-5452-5237
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| Organization name |
LSBM, RCAST
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| Street address |
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| City |
4-6-1, Komaba, Meguroku |
| State/province |
Tokyo |
| ZIP/Postal code |
153-8904 |
| Country |
Japan |
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| Platforms (1) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA177425 |
| SRA |
SRP016093 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE41553_TNF00min_cluster-PET1SPT0.tsv.gz |
65.7 Mb |
(ftp)(http) |
TSV |
| GSE41553_TNF30min_cluster-PET1SPT0.tsv.gz |
64.6 Mb |
(ftp)(http) |
TSV |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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