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Series GSE42453 Query DataSets for GSE42453
Status Public on Nov 22, 2012
Title UC San Diego_Friedmann_Kang_ESD3_Neuronal Differentiation
Organism Mus musculus
Experiment type Expression profiling by array
Summary The overall gene expression pattern of HPRT knockdown murine D3 stem cells during neuronal differentiation was invesitigated by microarray based gene expression analysis and the results were interpreted by GO, GSEA and signaling pathway analyses with GeneSpring GX and PANTHER Classification System.
 
Overall design For microarray experiment, total RNAs from replicated HPRT knockdown and control cultures were pooled and the microarray experiment with each pooled sample was triplicated, respectively.
 
Contributor(s) Kang TH, Friedmann T
Citation(s) 24130677
Submission date Nov 21, 2012
Last update date Sep 11, 2019
Contact name Tae Hyuk Kang
E-mail(s) t2kang@ucsd.edu
Phone 853-534-1419
Fax 858-534-1422
Organization name University of California, San Diego
Department Pediatrics
Lab Dr. Friedmann's laboratory
Street address 9500 Gilman Drive # 0634
City La Jolla
State/province CA
ZIP/Postal code 92093
Country USA
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (18)
GSM1040461 Control (ES)-1
GSM1040462 HPRT knockdown (ES)-1
GSM1040463 Control (SNM)-1
Relations
BioProject PRJNA181999

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42453_Kang_Friedmann_MouseWG-6_v2_Sample_Probe_Profile.txt.gz 11.6 Mb (ftp)(http) TXT
GSE42453_RAW.tar 15.8 Mb (http)(custom) TAR
GSE42453_non-normalized.txt.gz 5.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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