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Series GSE42622 Query DataSets for GSE42622
Status Public on Jul 02, 2013
Title Lactobacillus acidophilus and Helicobacter pylori stimulation of bone marrow derived macrophage
Organism Mus musculus
Experiment type Expression profiling by array
Summary Helicobacter pylori causes chronic gastritis and avoids elimination by the immune system of the infected host. The commensal bacterium Lactobacillus acidophilus has been reported to exert beneficial effects as a supplement during H. pylori eradication therapy.
In the present study, we applied whole genome microarray analysis to compare the immune response induced in murine bone marrow derived macrophages (BMDM) stimulated with L. acidophilus, H. pylori, or with both bacteria in combination
 
Overall design Microarray expression profiling was performed to analyze stimulation of bone marrow derived macrophages with Helicobacter pylori 251, Lactobacillus acidophilus NCFM or Lactobacillus acidophilus NCFM co-stimulated with Helicobacter pylori 251 were analyzed 5 hours after infection.
 
Contributor(s) Weiss G, Gould J, Forster S, Kaparakis-Liaskos M, Hertzog P
Citation(s) 23760466
Submission date Nov 29, 2012
Last update date May 10, 2018
Contact name Sam Forster
Organization name Monash University
Department Monash Institute
Lab Centre for Innate Immunity and Infectious Diseases
Street address 27 - 31 Wright Street
City Clayton
State/province Victoria
ZIP/Postal code 3168
Country Australia
 
Platforms (1)
GPL4134 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version)
Samples (12)
GSM1046106 0hr_Unstim_Rep1
GSM1046107 0hr_Unstim_Rep2
GSM1046108 0hr_Unstim_Rep3
Relations
BioProject PRJNA182370

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42622_RAW.tar 114.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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