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Series GSE42954 Query DataSets for GSE42954
Status Public on Aug 12, 2014
Title Expression profiling of prostate cancer biopsies.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary This work was conducted to identify shared and specific target genes of different ETS transcription factor rearrangements in prostate cancer. Potential target genes were identified by differential gene expression analysis of primary tumor samples with ETS rearrangements, and validated by ETS silencing in prostate cancer cell lines.
 
Overall design The series consists of 50 primary tumor samples from a consecutive series of 200 clinically localized cancers treated with radical prostatectomy at the Portuguese Oncology Institute, Porto, Portugal. The series is enriched in tumors with ETS transcription factor rearrangments.
 
Contributor(s) Teixeira MR, Paulo P, Sveen A, Skotheim RI
Citation(s) 22904677, 25109687
Submission date Dec 17, 2012
Last update date Feb 18, 2019
Contact name Manuel R. Teixeira
E-mail(s) manuelteixeira@ipoporto.min-saude.pt
Organization name Portuguese Oncology Institute-Porto
Department Department of Genetics
Street address Rua Dr. António Bernardino de Almeida
City Porto
ZIP/Postal code 4200-072
Country Portugal
 
Platforms (1)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
Samples (50)
GSM1053864 prostate cancer sample P209
GSM1053865 prostate cancer sample P223
GSM1053866 prostate cancer sample P227
Relations
BioProject PRJNA183937

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42954_RAW.tar 1.1 Gb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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