|
| Status |
Public on Feb 07, 2013 |
| Title |
Genome-wide binding of Yki and GAF in embryos and wing imaginal discs |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
23395637, 25017066 |
| Submission date |
Dec 22, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Kevin P. White |
| E-mail(s) |
kpwhite@uchicago.edu
|
| Organization name |
University of Chicago
|
| Department |
Institute for Genomics and Systems Biology
|
| Street address |
900 E. 57th STR. 10th FL.
|
| City |
Chicago |
| State/province |
IL |
| ZIP/Postal code |
60615 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL13304 |
Illumina HiSeq 2000 (Drosophila melanogaster) |
| GPL16424 |
AB 5500xl Genetic Analyzer (Drosophila melanogaster) |
|
| Samples (18)
|
| GSM945885 |
Yki embryo ChIP, replicate1 |
| GSM945886 |
Yki embryo ChIP, replicate2 |
| GSM945887 |
Yki embryo ChIP, replicate3 |
| GSM945888 |
H3K4me3 embryo ChIP, replicate1 |
| GSM945889 |
H3K4me3 embryo ChIP, replicate2 |
| GSM945890 |
Embryo input |
| GSM945891 |
GAF wing disc ChIP, replicate1 |
| GSM945892 |
GAF wing disc ChIP, replicate2 |
| GSM945893 |
Yki wing disc ChIP, replicate1 |
| GSM945894 |
Wing disc input, replicate1 |
| GSM945895 |
Wing disc input, replicate2 |
| GSM1057111 |
WT_wing_RNAseq_REP1 |
| GSM1057112 |
WT_wing_RNAseq_REP2 |
| GSM1057113 |
wtsP2_wing_RNAseq_REP1 |
| GSM1057114 |
wtsP2_wing_RNAseq_REP2 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE38594 |
Genome-wide binding of Yki and GAF in embryos and wing imaginal discs [ChIP-Seq] |
| GSE43129 |
Genome-wide binding of Yki and GAF in embryos and wing imaginal discs [RNA-Seq] |
|
| Relations |
| BioProject |
PRJNA184674 |
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