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Series GSE43166 Query DataSets for GSE43166
Status Public on Dec 30, 2012
Title Folate and vitamin B12 imbalance induces endoplasmic reticulum stress and cholesterol biosynthesis gene expression in human adipocytes
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Rationale: Low B12 has been shown to play an important role in the prediction of metabolic risk, but its significance and mechanism in the development of adiposity and adipose tissue dysfunction is largely unknown.

Objective: To investigate the role of B12 and folic acid in the development of adipocyte dysfunction.

Methods and Results: Microarray analysis of human adipocytes (CHUB-S7 cell line) cultured and differentiated in customised media with varying concentrations of B12 and folic acid led to the identification of two important pathways: cholesterol synthesis and unfolded protein response (UPR). Adipocytes cultured in media with low B12 (150 pmol/L) or no B12 had increased intracellular total cholesterol, higher secreted homocysteine levels, induced UPR and reduced glucose uptake capacity compared to adipocytes cultured in normal media with higher B12. The folate concentrations had either no or little effect on the measured functions. Further analysis of these adipocytes for overall DNA methylation showed that the promoter regions of sterol regulatory element-binding transcription factor 1 (SREBF1) and low density lipoprotein receptor (LDLR) were hypomethylated in the low and no B12 conditions. The SREB proteins (SREBP1 and 2) and mRNA expressions (SREBF1 and LDLR) were also increased in the same conditions.

Conclusion: The data suggest that low B12 can lead to adipocyte dysfunction by inducing excess cholesterol biosynthesis, homocysteine production and induction of UPR and overall adipocyte dysfunction. Both of these pathways and adipocyte dysfunction play a significant role in the development of cardiovascular diseases.
 
Overall design Independent replicate samples of the human adipocyte cell line CHUB-S7 were treated with four different concentrations of B12 and folate.
 
Contributor(s) Adaikalakoteswari A, McCarthy CM, Moore JD, Voyias PD, Harte AL, McTernan PG, Kumar S, Saravanan P, Tripathi G
Citation(s) 25763114
Submission date Dec 27, 2012
Last update date Oct 11, 2016
Contact name Jonathan David Moore
E-mail(s) jonathan.moore@tgac.ac.uk
Organization name The Genome Analysis Centre
Department Platforms and Pipelines
Street address Norwich Research Park
City Norwich
ZIP/Postal code NR4 7UH
Country United Kingdom
 
Platforms (1)
GPL14550 Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Probe Name Version)
Samples (15)
GSM1057742 CHUB-S7, B12-500nM, folate-6uM; 1
GSM1057743 CHUB-S7, B12-500nM, folate-6uM; 2
GSM1057744 CHUB-S7, B12-500nM, folate-6uM; 3
Relations
BioProject PRJNA184810

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43166_RAW.tar 46.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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