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| Status |
Public on Jan 11, 2013 |
| Title |
Expression data from the telencephalon of wild-type and rSey2/rSey2 rats |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by array
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| Summary |
Pax6 is one of the important transcription factors involved in regional specification and neurogenesis in the developing cortex.
To identify candidate target genes of Pax6, we performed transcriptome analyses of wild-type (WT) and Pax6 homozygous mutant rats (rSey2/rSey2) telencephalons at E11.5 within a day of onset of Pax6 expression. In our transcriptome analyses, down-regulated genes in the rSey2/rSey2 rat exhibited larger fold changes, whereas up-regulated genes had relatively small fold changes.
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| Overall design |
Total RNA was prepared using from 13 telencephalon dissected from E11.5 WT or rSey2/rSey2 rats embryos. Experiments using 13 telencephaon were repeated twice in each genotype.
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| Contributor(s) |
Fukuzaki U, Numayama-Tsuruta K, Kikkawa T, Osumi N |
| Citation(s) |
23679989 |
| Submission date |
Jan 10, 2013 |
| Last update date |
Jul 31, 2017 |
| Contact name |
Takako Kikkawa |
| Organization name |
Tohoku University Graduate School of Medicine
|
| Street address |
2-1, Seiryo-machi, Aoba-ku
|
| City |
Sendai |
| State/province |
Miyagi |
| ZIP/Postal code |
980-8575 |
| Country |
Japan |
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| Platforms (1) |
| GPL1355 |
[Rat230_2] Affymetrix Rat Genome 230 2.0 Array |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA186011 |
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