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Series GSE44221 Query DataSets for GSE44221
Status Public on Aug 01, 2013
Title Identification of chromatin regulatory sites in conditions of basal and increased SF-1 dosage in the H295R adrenocortical tumor cell line
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary The goal of this study was to identify chromatin regulatory sites by FAIRE-seq under conditions of basal and increased dosage of transcription factor SF-1 in the H295R human adrenocortical tumor cell line.
 
Overall design 4 samples: input DNA in basal SF-1 expression conditions - FAIRE-seq in basal SF-1 expression conditions - input DNA in SF-1 overexpression conditions - FAIRE-seq in SF-1 overexpression conditions
 
Contributor(s) Lalli E
Citation(s) 23907384
Submission date Feb 11, 2013
Last update date May 15, 2019
Contact name Enzo LALLI
E-mail(s) ninino@ipmc.cnrs.fr
Phone +33 (0)4 93 95 77 55
Organization name IPMC
Department CNRS UMR 7275
Lab 402
Street address 660 route des Lucioles
City Valbonne
ZIP/Postal code 06560
Country France
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (4)
GSM1080952 FAIRE-seq basal SF-1 expression
GSM1080953 FAIRE-seq SF-1 overexpression
GSM1080954 input DNA basal SF-1 expression
This SubSeries is part of SuperSeries:
GSE44224 Mechanisms of dosage-dependent regulation of gene expression by transcription factor SF-1
Relations
BioProject PRJNA189200
SRA SRP018564

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44221_RAW.tar 720.0 Kb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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