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Series GSE46010 Query DataSets for GSE46010
Status Public on Feb 06, 2014
Title The gene expression change of RNF31 depletion in MCF-7 cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary RNF31 is atypical E3 ligase, which is highly expressed in human breast cancers. In order to understand the effect of RNF31 depletion effect in breast cancers, we knocked down the expression of RNF31 in MCF-7 cells. We aim to find the significantly changed pathways and cell biology behavior.
 
Overall design 100uM RNF31 siRNA was applied to transfect the MCF-7 cells, while 100uM siControl was used as the control. Cells were cultured in DMEM red medium with 10% of FBS. Seventy two hours of post transfection, the total RNA was extracted to perform RNA expression analysis.
 
Contributor(s) Zhu J, Dahlman-Wright K
Citation(s) 24441041
Submission date Apr 11, 2013
Last update date Jan 23, 2019
Contact name Chunyan Zhao
E-mail(s) chunyan.zhao@ki.se
Phone 46-8-52481126
Fax 46-8-7745538
Organization name Karolinska Institute
Department Biosciences and Nutrition
Street address Hälsovägen 7-9
City Stockholm
ZIP/Postal code SE-171 77
Country Sweden
 
Platforms (1)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
Samples (7)
GSM1121695 Knocking down control_1
GSM1121696 Knocking down control_2
GSM1121697 Knocking down control_3
Relations
BioProject PRJNA196872

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46010_RAW.tar 14.9 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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