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Series GSE46121 Query DataSets for GSE46121
Status Public on Jul 01, 2013
Title Changes in DNaseI hypersensitivity upon co-treatment of cells with Dex and E2
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report changes in DNaseI accessibility genome-wide upon co-treatment with Dex and E2 when compared to Dex or E2 treatments alone.
 
Overall design We examine ER and GR binding under four different treatments (unt, Dex, E2, and Dex + E2).
 
Contributor(s) Miranda TB, Hager G, Baek S, Sung M
Citation(s) 23803465
Submission date Apr 16, 2013
Last update date May 15, 2019
Contact name Songjoon Baek
Organization name NCI / NIH
Department CCR
Lab LRBGE
Street address 41 Library Drive
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL9185 Illumina Genome Analyzer (Mus musculus)
Samples (4)
GSM1123948 DNase-Seq (untreated)
GSM1123949 DNase-Seq (+Dex)
GSM1123950 DNase-Seq (+E2)
This SubSeries is part of SuperSeries:
GSE46124 ER, GR, and E2
Relations
BioProject PRJNA197289
SRA SRP021111

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46121_RAW.tar 115.4 Mb (http)(custom) TAR (of BEDGRAPH, CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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