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| Status |
Public on Jul 01, 2013 |
| Title |
Whole transcriptome RNA-seq of undiseased human prefrontal cortex |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
We report the application of high-throughput RNA sequencing to the human prefrontal cortex. The brain dataset was obtained by sequencing total RNAs extracted from the dorsolateral prefrontal cortex of five deceased human patients with no apparent pathology, followed by depletion of ribosomal RNA to obtain all non-rRNA coding and non-coding RNAs in the human brain transcriptome.
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| |
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| Overall design |
Five samples were sequenced, four coming from frozen brain tissue (frontal cortex) of deceased female human patients with no remarkable pathology, and one from a male patient with no remarkable pathology.
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| |
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| Contributor(s) |
Wang L, Gregory BD |
| Citation(s) |
24149843 |
| Submission date |
Apr 30, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Paul Ryvkin |
| Organization name |
University of Pennsylvania
|
| Department |
Pathology
|
| Lab |
Li-San Wang's Lab
|
| Street address |
423 Guardian Dr, 1404 Blockley Hall
|
| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
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| Samples (5)
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| Relations |
| BioProject |
PRJNA200727 |
| SRA |
SRP021924 |
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