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Series GSE46823 Query DataSets for GSE46823
Status Public on Jul 01, 2014
Title miRNA expression profiles of primary ER-positive breast tumors following Tamoxifen treatment
Platform organism synthetic construct
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary Adjuvant tamoxifen is a valid treatment option for women with estrogen receptor (ER)-positive breast cancer. However, up to 40% of patients experience distant or local recurrence or die. MicroRNAs have been suggested to be important prognosticators in breast cancer. This study aims to identify microRNAs with the potential to predict tamoxifen response.
We performed a global microRNA screen in primary tumours of six matched pairs of postmenopausal, ER-positive breast cancer patients treated with tamoxifen, who were either recurrence free or had developed a recurrence. Patients were treated at the Robert Bosch Hospital, Stuttgart, Germany, between 1986 and 2005.
 
Overall design Total RNA from FFPE tissue from 12 postmenopausal patients with ER-positive breast cancer (6 patients with and 6 patients without recurrence) was extracted. Hybridisation of biotin-labelled RNA was performed on Affymetrix GeneChip miRNA_2.0 Arrays.
 
Contributor(s) Hoppe R, Achinger-Kawecka J, Winter S, Fritz P, Lo W, Schroth W, Brauch H
Citation(s) 23968733
Submission date May 10, 2013
Last update date May 02, 2017
Contact name Hiltrud Brauch
E-mail(s) hiltrud.brauch@ikp-stuttgart.de
Organization name Dr. Margarete Fischer-Bosch - Institute of Clinical Pharmacology
Street address Auerbachstr. 112
City Stuttgart
ZIP/Postal code 70376
Country Germany
 
Platforms (1)
GPL14613 [miRNA-2] Affymetrix Multispecies miRNA-2 Array
Samples (12)
GSM1138827 breast tumor [TAM_308]
GSM1138828 breast tumor [TAM_12]
GSM1138829 breast tumor [TAM_51]
Relations
BioProject PRJNA202408

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46823_RAW.tar 7.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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