|
| Status |
Public on Aug 01, 2013 |
| Title |
Genome wide mapping of effects of U6atac knockdown on pre-mRNA splicing |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
This project looks into experimentally identifying all minor introns by knocking down the minor spliceosome's catalytic snRNP, U6atac.
|
| |
|
| Overall design |
Knockdown of U6atac by antisense morpholino followed by examining mRNA splicing by RNA-seq
|
| |
|
| Contributor(s) |
Younis I, dreyfuss G |
| Citation(s) |
23908766 |
| Submission date |
Jun 25, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Ihab Younis |
| E-mail(s) |
younis@mail.med.upenn.edu
|
| Organization name |
University of Pennsylvania
|
| Department |
Biochemistry and Biophysics
|
| Lab |
Gideon Dreyfuss
|
| Street address |
415 Curie Blvd
|
| City |
philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (2) |
|
| Relations |
| BioProject |
PRJNA209423 |
| SRA |
SRP026297 |
