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Series GSE48392 Query DataSets for GSE48392
Status Public on Nov 30, 2013
Title Response of mammary tissue to high-LET HZE particle (Silicon ions) radiation or low-LET gamma-rays
Organism Mus musculus
Experiment type Expression profiling by array
Summary Transcriptional profiling of mammary tissue irradiated at 10 weeks of age with either 100 cGy sparsely ionizing gamma-rays, or 10 cGy or 30 cGy densely ionizing radiation (350 MeV/amu Si). Mammary tissue was collected 1 weeks, 4 weeks, and 12 weeks post-irradiation.
 
Overall design Four radiation treatment groups: sham, 100 cGy sparsely ionizing gamma-rays, 10 cGy or 30 cGy densely ionizing radiation (350 MeV/amu Si). Three time points post-irradiation (1, 4, and 12 weeks). Three or four replicates per time point.
 
Contributor(s) Tang J, Fernandez-Garcia I, Vijayakumar S, Martinez-Ruis H, Bochaca I, Nguyen D, Mao J, Costes SV, Barcellos-Hoff MH
Citation(s) 24038768
Submission date Jun 28, 2013
Last update date Apr 18, 2017
Contact name Jonathan Tang
E-mail(s) jonathantang@lbl.gov
Organization name Lawrence Berkeley National Laboratory
Department Cancer and DNA Damage Response
Street address 1 Cyclotron Road, MS-977
City Berkeley
State/province CA
ZIP/Postal code 94720
Country USA
 
Platforms (1)
GPL11533 [MoGene-1_1-st] Affymetrix Mouse Gene 1.1 ST Array [transcript (gene) version]
Samples (37)
GSM1176954 mouse_mammary_irradiated_100cGy_Gamma_Wk1-post-IR_Rep1
GSM1176955 mouse_mammary_irradiated_100cGy_Gamma_Wk1-post-IR_Rep2
GSM1176956 mouse_mammary_irradiated_100cGy_Gamma_Wk1-post-IR_Rep3
Relations
BioProject PRJNA209937

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48392_RAW.tar 160.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
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