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Series GSE48403 Query DataSets for GSE48403
Status Public on Oct 07, 2013
Title The Wnt/β-catenin-signaling pathway is modulated by androgen ablation therapy for advanced clinical prostate cancer and contributes to androgen independent cell growth
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Androgen ablation therapy (AAT) is standard treatment for locally-advanced/metastatic prostate cancer (PCa). Many patients develop castration-resistance (CRPCa) after ~2-3 years, with a poor prognosis. The molecular mechanisms underlying CRPCa progression are unclear. mRNA-Seq was performed on tumours from 7 patients with locally-advanced/metastatic PCa before and ~22 weeks after AAT initiation. Differentially regulated genes were identified in treatment pairs.
 
Overall design Tumour biopsies from 7 patients were taken before and after AAT treatment
 
Contributor(s) Sudbery I, Rajan P, Villasevil MM, Mui E, Fleming J, Davis M, Abdul Razak AR, Ahmad I, Edwards J, Sansom OJ, Sims D, Ponting CP, Heger A, McMenemin RM, Pedley ID, Leung HY
Citation(s) 24054872
Submission date Jun 28, 2013
Last update date May 15, 2019
Contact name Ian Sudbery
E-mail(s) i.sudbery@sheffield.ac.uk
Organization name University of Sheffield
Department Molecular Biology and Biotechnology
Lab Sudbery Lab for Computational Genomics
Street address Firth Court, Western Bank
City Sheffield
ZIP/Postal code S11 8HG
Country United Kingdom
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (14)
GSM1177208 Prostate-Pre-R1
GSM1177209 Prostate-Pre-R2
GSM1177210 Prostate-Pre-R3
Relations
BioProject PRJNA209978
SRA SRP026387

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48403_refcoding_Pre_vs_PostDesign_edgeR_results.tsv.gz 770.0 Kb (ftp)(http) TSV
GSE48403_refcoding_read_counts.txt.gz 459.7 Kb (ftp)(http) TXT
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Processed data are available on Series record
Raw data are available in SRA

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