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| Status |
Public on May 01, 2015 |
| Title |
Drosophila ROW RNAi gene expression profiling |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by array
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| Summary |
Heterochromatin-protein 1 (HP1) is a functionally diverse family of proteins. In particular, Drosophila dHP1c forms a complex with the transcription factors WOC and ROW (dHP1EU) that localizes at euchromatin and regulates gene expression.
We used microarrays to analyse the changes in gene expression after row depletion by RNAi.
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| Overall design |
For expression profiling analyses, total RNAs were prepared from control S2 cells and upon RNAi-mediated depletion of ROW, converted to cDNA and hybridized to Drosophila Genome 2.0 GeneChip (Affymetrix).
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| Contributor(s) |
Font-Burgada J, Azorín F |
| Citation(s) |
25916810 |
| Submission date |
Jul 22, 2013 |
| Last update date |
May 04, 2018 |
| Contact name |
Oscar Reina Garcia |
| E-mail(s) |
oscar.reina@irbbarcelona.org
|
| Organization name |
IRB Barcelona
|
| Department |
Biostatistics and Bioinformatics
|
| Street address |
C/Baldiri Reixac 10
|
| City |
Barcelona |
| State/province |
Barcelona |
| ZIP/Postal code |
08028 |
| Country |
Spain |
| |
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| Platforms (1) |
| GPL1322 |
[Drosophila_2] Affymetrix Drosophila Genome 2.0 Array |
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| Samples (6)
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| This SubSeries is part of SuperSeries: |
| GSE49104 |
dDsk2 stabilizes dHP1c binding at TSS |
|
| Relations |
| BioProject |
PRJNA213109 |
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