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Series GSE49369 Query DataSets for GSE49369
Status Public on May 14, 2018
Title TIGIT+ iTregs elicited by human regulatory macrophages control T cell immunity
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Human regulatory macrophages (Mreg) have shown early clinical promise as a cell-based, adjunct immunosuppressive therapy in solid organ transplantation. It is hypothesised that recipient CD4+ T cell responses are actively regulated through direct allorecognition of donor-derived Mregs. Here we show that human Mregs convert allogeneic CD4+ T cells to IL-10-producing, TIGIT+ FoxP3+ induced regulatory T cells that non-specifically suppress bystander T cells and inhibit dendritic cell maturation. Differentiation of Mreg-induced Tregs (miTregs) relies on multiple, non-redundant mechanisms that are not exclusive to interaction of Mregs and T cells, including signals mediated by indoleamine 2,3-dioxygenase, TGF-β, retinoic acid, Notch and progestagen-associated endometrial protein. Preoperative administration of donor-derived Mregs to living-donor kidney transplant recipients results in an acute increase in circulating TIGIT+ Tregs. These results suggest a feed-forward mechanism by which Mreg treatment promotes allograft acceptance through rapid induction of direct pathway Tregs.
 
Overall design To better characterise the phenotype of human miTregs, whole genome gene expression profiling studies by microarray were performed. Mregs and IFN-γ Mφ were generated from CD14+ monocytes of 5 healthy donors. Seven days later, CD3+ T cells were isolated from 5 unrelated healthy donors and split into two lots: From the first lot, a pure population of fresh CD4+ T cells was obtained by flow-sorting and total RNA was extracted; the second lot of T cells was added into direct co-culture with allogeneic Mregs or IFN-γ Mφ at a 1:1 ratio for 5 days, or were cultured alone without stimulation for 5 days. After coculture, CD4+ and CD8+ T cells were flow-sorted and total RNA was extracted. Microarray analysis was performed on the Agilent Whole Human Genome Oligo Microarray 8x60K platform. Hence, a dataset was generated comprising eight sample groups (S1-S8) representing four CD4+ T cell populations and four CD8+ T cell populations from 5 independent donors produced by single-colour hybridisations.
 
Contributor(s) Riquelme P, Tomiuk S, Hutchinson JA
Citation(s) 30030423
Submission date Jul 30, 2013
Last update date Aug 13, 2018
Contact name James Alexander Hutchinson
E-mail(s) james.hutchinson@klinik.uni-regensburg.de
Organization name University Hospital Regensburg
Department General Surgery
Lab Transplant Immunology
Street address Franz-Josef-Strauss-Allee-11
City Regensburg
State/province Bavaria
ZIP/Postal code 93053
Country Germany
 
Platforms (1)
GPL14550 Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Probe Name Version)
Samples (40)
GSM1198191 CD4_control_d0_donor427
GSM1198192 CD4_control_d0_donor451
GSM1198193 CD4_control_d0_donor452
Relations
BioProject PRJNA213736

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE49369_RAW.tar 489.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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