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Series GSE51049 Query DataSets for GSE51049
Status Public on Sep 20, 2013
Title A mechanistic study on the metastasis inducing function of FUS-CHOP fusion protein in liposarcoma
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Identification of differential gene regulation pattern in human liposarcoma
The FUS-CHOP fusion protein has been found to be instrumental for specific oncogenic processes in liposarcoma, but its ability to induce metastasis and the underlying mechanisms by which this can be achieved remain unknown. In order to dissect its functional role in this context, we stably overexpressed this protein in SW872 liposarcoma and HT1080 fibrosarcoma cell lines, and were able to demonstrate that forced expression of FUS-CHOP significantly increases migration and invasion, as well as enhance lung and liver metastasis in the in vivo chicken chorioallantoic membrane (CAM) model, that is proliferation independent. Additionally, FUS-CHOP enhances the expression of matrix-metalloproteinases -2 and -9, and transactivates their promoters in vitro. Mutational analysis showed that C/EBP-β- (-769/-755), NF-κB (-525/-516) and CREB/AP-1 (-218/-207) sites were important for MMP-2, and NF-κB (-604/-598), AP-1 (-539/-532) and AP-1 (-81/-72) for MMP-9 transactivation. Moreover, a direct in vivo interaction of FUS-CHOP was observed in case of the MMP-2 promoter within region (-769/-207). siRNA data revealed that MMP-2 expression is essential in the FUS-CHOP induced metastatic phenotype. MMP-2-mRNA and protein expression correlated significantly with FUS-CHOP positivity in 31 resected patient liposarcoma tissues. We have for the first time provided substantial evidence for the FUS-CHOP oncoprotein as an inducer of metastasis that is due to the transcriptional induction of specific tumor-associated proteases. Insights gained from this study not only support a deeper understanding of the mechanistic properties of FUS-CHOP, but also open up new avenues for targeted therapy.
 
Overall design 3 liposarcoma tumor samples, 3 corresponding normal samples, one sample replicated
 
Contributor(s) Patil N, Heil O
Citation(s) 24285420
Submission date Sep 20, 2013
Last update date Feb 18, 2019
Contact name Nitin Patil
E-mail(s) n.patil@dkfz.de
Organization name German Cancer Research Centre (DKFZ)
Department Molecular Oncology of Solid Tumors
Lab G360
Street address Im Neuenheimer Feld 280
City Heidelberg
State/province BW
ZIP/Postal code 69120
Country Germany
 
Platforms (1)
GPL6884 Illumina HumanWG-6 v3.0 expression beadchip
Samples (8)
GSM1236544 806 Normal
GSM1236545 806 Tumor
GSM1236546 823 Normal_WDH
Relations
BioProject PRJNA219749

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51049_RAW.tar 6.3 Mb (http)(custom) TAR
GSE51049_non-normalized_data.txt.gz 3.7 Mb (ftp)(http) TXT
Processed data included within Sample table

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