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Series GSE51688 Query DataSets for GSE51688
Status Public on Dec 31, 2014
Title DNA methylation profiles of ovarian cancer cell lines
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiling of ovarian cancer cell lines and normal cells. The Illumina Infinium 27k Human DNA methylation Beadchip was used to obtain DNA methylation profiles for approximately 27,000 CpGs. Samples included 46 ovarian cancer cell lines, 4 normal counterparts and 8 controls.
 
Overall design Bisulfite converted DNA from the 58 samples were hybridised to the Illumina Infinium 27k Human Methylation Beadchip
 
Contributor(s) Murphy SK, Berchuck A
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Submission date Oct 24, 2013
Last update date Jan 02, 2015
Contact name Susan K. Murphy
Organization name Duke University Medical Center
Department Obstetrics and Gynecology
Street address B226 LSRC B Wing, Research Drive, Box 91012
City Durham
State/province NC
ZIP/Postal code 27708
Country USA
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (58)
GSM1250505 genomic DNA from ovarian cancer cell line_41M
GSM1250506 genomic DNA from ovarian cancer cell line_Caov-3
GSM1250507 genomic DNA from ovarian cancer cell line_DOV13
Relations
BioProject PRJNA224565

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51688_RAW.tar 5.8 Mb (http)(custom) TAR
GSE51688_non_normalized.txt.gz 7.9 Mb (ftp)(http) TXT
Processed data included within Sample table
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