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Series GSE52080 Query DataSets for GSE52080
Status Public on Oct 31, 2014
Title Transcriptome of Nkx2-5-null atria
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Atrial specific knockout of Nkx2-5 results in hyperplastic atria with ASD and conduction defects. To examine how Nkx2-5 regulates cardiac proliferation at late gestational stages, RNA-seq was performed.
 
Overall design Examination of expression profile of 2 Nkx2-5-null atria and 3 controls
 
Contributor(s) Nakashima Y, Yanez DA, Touma M, Nakano H, Jaroszewicz A, Jordan MC, Pellegrini M, Roos KP, Nakano A
Citation(s) 24563458
Submission date Nov 05, 2013
Last update date May 15, 2019
Contact name Atsushi Nakano
E-mail(s) anakano@ucla.edu
Phone 3102671897
Organization name UCLA
Department MCDB/BSCRC
Street address 615 Charles E. Young Dr. South
City Los Angeles
State/province California
ZIP/Postal code 90095
Country USA
 
Platforms (1)
GPL9185 Illumina Genome Analyzer (Mus musculus)
Samples (5)
GSM1259090 Control 2
GSM1259091 Control 4
GSM1259092 Control 6
Relations
BioProject PRJNA226638
SRA SRP032537

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE52080_processed_data.txt.gz 3.5 Mb (ftp)(http) TXT
GSE52080_processed_data_pvalue-filtered.txt.gz 247.3 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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