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Series GSE53434 Query DataSets for GSE53434
Status Public on Dec 31, 2016
Title TALEN-mediated MeCP2 Gene Mutagenesis in Rhesus and Cynomolgus Monkeys
Organism Macaca mulatta
Experiment type Expression profiling by high throughput sequencing
Summary We report Transcription Activator-like Effector Nucleases (TALEN)-mediated mutagenesis of the Rett Syndrome gene, methyl-CpG binding protein 2 (Mecp2), in nonhuman primates (NHPs). Microinjection of Mecp2-targeting TALEN plasmids into rhesus and cynomolgus zygotes caused 40-50% of the embryos harboring mutations when examined beyond 8-cell stage. The surrogate pregnancy rates were 28.6% (2/7) and 16.7% (1/6) for rhesus and cynomolgus, respectively. The 2 rhesus surrogates went through miscarriage at 30- and 63/64-days of gestation. Analyses of two 63/64-day-old liter-mate embryos indicated both were male and carried MeCP2 mutations, yet chimeric. Mutation rate was higher in one embryonic brain than the other. RNA sequencing and anatomical analyses indicated that the brain with higher-degree mutations was underdeveloped, which, together with mid-gestation-stage male lethality likely recapitulate the disease. One live delivery of a female cynomolgus monkey occurred after 162 days of gestation, with abundant mutagenesis in peripheral tissues examined. We conclude that TALEN-mediated mutagenesis greatly facilitates disease modeling in NHPs.
 
Overall design Examination of 25 different tissues transcriptome from the two aborted male rhesus monkeys
 
Contributor(s) Liu H
Citation(s) 24529597
BioProject PRJNA230664
Submission date Dec 18, 2013
Last update date May 15, 2019
Contact name hygine lin
E-mail(s) haijunlin@163.com
Phone +8615026869194
Organization name tongji unversity
Street address siping road 1239
City shanghai
ZIP/Postal code none
Country China
 
Platforms (1)
GPL14954 Illumina HiSeq 2000 (Macaca mulatta)
Samples (25)
GSM1293413 Placenta
GSM1293414 A-Leg
GSM1293415 A-Intestinal
Relations
SRA SRP033627

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53434_rhesus_ensemble_all.cvrg.txt.gz 3.8 Mb (ftp)(http) TXT
GSE53434_rhesus_ensemble_all.fpkm.txt.gz 3.8 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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