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Series GSE54830 Query DataSets for GSE54830
Status Public on Jul 01, 2014
Title Up-regulation of IFN-related genes in BRCA2-/- cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Microarray-based expression profiling of BRCA2 knockout and isogenic wild type HCT116 human colorectal cancer cells
 
Overall design One way ANOVA, single factor comparison of wild type and BRCA2 knockout cells, three CEL files for wild type, three CEL files for BRCA2 knockout
 
Contributor(s) Xu H, Xian J, Vire E, McKinney S, Wong J, Wei V, Tong R, Kouzarides T, Caldas C, Aparicio S
Citation(s) 25043256
Submission date Feb 10, 2014
Last update date Feb 18, 2019
Contact name Steven McKinney
E-mail(s) smckinney@bccrc.ca
Phone 604-675-8000
Organization name British Columbia Cancer Agency
Department Molecular Oncology
Lab Samuel Aparicio
Street address 675 West 10th Ave
City Vancouver
State/province BC
ZIP/Postal code V5Z 1L3
Country Canada
 
Platforms (1)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
Samples (6)
GSM1324524 Wild type technical replicate 1
GSM1324525 Wild type technical replicate 2
GSM1324526 Wild type technical replicate 3
Relations
BioProject PRJNA237832

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE54830_RAW.tar 132.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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