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GEO accession:
Series GSE56408
Query DataSets for GSE56408
Status
Public on Jun 18, 2014
Title
Correcting Direct Effects of Ethanol on Translation and Transcription Machinery Confers Ethanol Tolerance in Bacteria
Organism
Escherichia coli
Experiment type
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
24927582
Submission date
Apr 01, 2014
Last update date
May 15, 2019
Contact name
Rembrandt Haft
Organization name
University of Wisconsin
Department
Great Lakes Bioenergy Research Center
Lab
Landick Lab
Street address
1550 Linden Dr. Room 5445
City
Madison
State/province
WI
ZIP/Postal code
53703
Country
USA
Platforms (2)
GPL10328
Illumina Genome Analyzer II (Escherichia coli)
GPL14548
Illumina HiSeq 2000 (Escherichia coli)
Samples (26)
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GSM1360030
Wild-type (MG1655) T0 RNA rep 1
GSM1360031
Wild-type (MG1655) T0 RNA rep 2
GSM1360032
Wild-type (MG1655) T1 RNA rep 1
GSM1360033
Wild-type (MG1655) T1 RNA rep 2
GSM1360034
Wild-type (MG1655) T2 RNA rep 1
GSM1360035
Wild-type (MG1655) T2 RNA rep 2
GSM1360036
Mutant (EP61) T0 RNA rep 1
GSM1360037
Mutant (EP61) T0 RNA rep 2
GSM1360038
Mutant (EP61) T1 RNA rep 1
GSM1360039
Mutant (EP61) T1 RNA rep 2
GSM1360040
Mutant (EP61) T2 RNA rep 1
GSM1360041
Mutant (EP61) T2 RNA rep 2
GSM1360042
Wild-type (MG1655) T0 RP rep 1
GSM1360043
Wild-type (MG1655) T0 RP rep 2
GSM1360044
Wild-type (MG1655) T1 RP rep 1
GSM1360045
Wild-type (MG1655) T1 RP rep 2
GSM1360046
Wild-type (MG1655) T2 RP rep 1
GSM1360047
Wild-type (MG1655) T2 RP rep 2
GSM1360048
Mutant (EP61) T0 RP rep 1
GSM1360049
Mutant (EP61) T0 RP rep 2
GSM1360050
Mutant (EP61) T1 RP rep 1
GSM1360051
Mutant (EP61) T1 RP rep 2
GSM1360052
Mutant (EP61) T2 RP rep 1
GSM1360053
Mutant (EP61) T2 RP rep 2
GSM1360954
Wild-type (MG1655) RNA-seq
GSM1360955
Mutant (RL2325) RNA-seq
This SuperSeries is composed of the following SubSeries:
GSE56372
Correcting Direct Effects of Ethanol on Translation and Transcription Machinery Confers Ethanol Tolerance in Bacteria [Ribosome_Profiling]
GSE56407
Correcting Direct Effects of Ethanol on Translation and Transcription Machinery Confers Ethanol Tolerance in Bacteria [Terminator_Readthrough_RNAseq]
Relations
BioProject
PRJNA243253
Download family
Format
SOFT formatted family file(s)
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Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE56408_RAW.tar
184.8 Mb
(http)
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TAR (of WIG)
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