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Series GSE56454 Query DataSets for GSE56454
Status Public on Jun 01, 2014
Title Seminoma and embryonal carcinoma footprints identified by analysis of integrated genome-wide epigenetic and expression profiles of germ cell cancer cell lines
Organism Homo sapiens
Experiment type Expression profiling by array
Methylation profiling by genome tiling array
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 24887064
Submission date Apr 02, 2014
Last update date May 15, 2019
Contact name Martin Anne Rijlaarsdam
E-mail(s) m.a.rijlaarsdam@gmail.com
Phone 0031645408508
Organization name Erasmus MC
Department Pathology
Lab Laboratory for Experimental Patho-Oncology (LEPO)
Street address Wytemaweg 80
City Rotterdam
ZIP/Postal code 3015 CN
Country Netherlands
 
Platforms (3)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
GPL16288 AB 5500xl Genetic Analyzer (Homo sapiens)
Samples (10)
GSM1360136 TCam-2 - SE cell line 102251-01
GSM1360137 TCam-2 - SE cell line 102251-02
GSM1360138 NCCIT - EC cell line 102251-05
This SuperSeries is composed of the following SubSeries:
GSE56381 Seminoma and embryonal carcinoma footprints identified by analysis of integrated genome-wide epigenetic and expression profiles of germ cell cancer cell lines (gene expression data).
GSE56382 Seminoma and embryonal carcinoma footprints identified by analysis of integrated genome-wide epigenetic and expression profiles of germ cell cancer cell lines (methylation data).
GSE56450 Seminoma and embryonal carcinoma footprints identified by analysis of integrated genome-wide epigenetic and expression profiles of germ cell cancer cell lines (ChIP-seq data).
Relations
BioProject PRJNA243361

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE56454_RAW.tar 431.8 Mb (http)(custom) TAR (of BEDGRAPH, TXT)
SRA Run SelectorHelp

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