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Series GSE56583 Query DataSets for GSE56583
Status Public on Apr 08, 2014
Title Effects of vitamin D supplementation on alveolar macrophage gene expression
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The objective of the overall study was to determine the effects of oral vitamin D supplementation on alveolar macrophages from human subjects. In this substudy, subjects treated with vitamin D (intervention group) in paired analysis had small, but significant effects on immune-related differential gene expression pre versus post supplementation.
In this study, we obtained alveolar macrophages by bronchoalveolar lavage of subjects before and after a 3 month vitamin D trial. RNA for the array was obtained shortly after bronchoscopy.
 
Overall design Randomized Controlled Trial: This is a substudy of paired samples of subjects treated with vitamin D. Each sample was studied once. 22 individuals were studied.
 
Contributor(s) Gerke AK, Bair TB, Monick MM
Citation(s) 24669961, 28883932
Submission date Apr 08, 2014
Last update date Aug 26, 2019
Contact name Thomas B Bair
E-mail(s) iihg-bioinformatics@uiowa.edu
Organization name University of Iowa
Street address 335 EMRB
City Iowa City
State/province IA
ZIP/Postal code 52242
Country USA
 
Platforms (1)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
Samples (44)
GSM1364660 Macrophage-VitaminD-Subject1Pre
GSM1364661 Macrophage-VitaminD-Subject2Pre
GSM1364662 Macrophage-VitaminD-Subject3Pre
Relations
BioProject PRJNA243998

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE56583_RAW.tar 881.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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