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Series GSE59483 Query DataSets for GSE59483
Status Public on Jul 01, 2017
Title Transcriptomic analysis of an archived bladder cancer cohort
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Establishment and application of RNAseq based transcriptome analayis on an archivaed bladder cancer cohort.
 
Overall design Total RNA profilling 61 archived bladder cancer samples and comparison of 4 pairs of fresh frozen and FFPE bladder cancer samples.
 
Contributor(s) Liu Y, Wrana J, Azad A
Citation(s) 25199720
Submission date Jul 16, 2014
Last update date May 15, 2019
Contact name Yu Liu
E-mail(s) yu.liu4@umassmed.edu
Organization name University of Massachusetts Medical School
Department Program in Systems Biology
Lab Job Dekker
Street address AS5-1018, 368 Plantation Street
City Worcester
State/province MA
ZIP/Postal code 01606
Country USA
 
Platforms (2)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (67)
GSM1437655 BC001
GSM1437656 BC002
GSM1437657 BC003
Relations
BioProject PRJNA255416
SRA SRP044373

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE59483_all_truRPMs.txt.gz 12.5 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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