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Series GSE59634 Query DataSets for GSE59634
Status Public on Apr 08, 2015
Title Established glioma cell lines prove valuable models for tumour heterogeneity - mediated cellular response studies in vitro
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Both established glioma cells lines U87MG and U373 were used for studying their interactions in the indirect co-cultures. Eventhough both being derived from the glioma tissue, those two cell lines prove morphologically and physiologically disctinct. Therefore their intre-cellular interactions were examined on gene exprexssion level in vitro to observe whether those co-cultures could make for a suitable in vitro cell model mimicking the in vivo glioma tumour heterogeneity.
 
Overall design Three biological replicates of four cell set-ups were performed: U87MG monoculture, U373 monoculture, U87MG co-cultured with U373 (in Boyden chambers) and U373 co-cultured with U87MG (in Boyden chambers).
 
Contributor(s) Motaln H, Lah TT, Gruden K, Rotter A, van Noorden CJ, Verbovsek U
Citation(s) 25356585, 26517510
Submission date Jul 21, 2014
Last update date Jul 29, 2019
Contact name Ana Rotter
E-mail(s) ana.rotter@nib.si
Phone +38659232940
Organization name National Institute of BIology
Department Marine Biology Station
Street address Fornace 41
City Piran
ZIP/Postal code 6330
Country Slovenia
 
Platforms (1)
GPL6884 Illumina HumanWG-6 v3.0 expression beadchip
Samples (12)
GSM1440969 U373_monoculture_rep 1
GSM1440970 U87MG_monoculture_rep 1
GSM1440971 U87MG_in-direct_co-culture_rep 1
Relations
BioProject PRJNA255790

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE59634_RAW.tar 6.3 Mb (http)(custom) TAR
GSE59634_non-normalized.txt.gz 2.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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