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Series GSE59745 Query DataSets for GSE59745
Status Public on Mar 02, 2015
Title Identification of novel long non-coding RNAs in prostate cancers
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary Long non-coding RNAs show highly tissue and disease specific expression profiles. We analyzed prostate cancer and normal adjacent prostate samples to identify cancer-specific transcripts and found 334 candidates, of which 15 were validated by RT-PCR.
 
Overall design 8 Prostate cancer samples from radical prostatectomies, 12 samples from normal adjacent prostate, 12 samples from lymph node metastasis and 10 samples from transurethral resection of the prostrate were included in this study. These samples contained more than 70% cancer and less than 30% stromal tissue.
 
Contributor(s) Böttcher R, Jenster G
Citation(s) 25686826
Submission date Jul 24, 2014
Last update date Feb 18, 2019
Contact name Guido Jenster
E-mail(s) g.jenster@erasmusmc.nl
Phone 31107043672
Organization name Erasmus MC
Department Urology
Lab JNI, Be362a
Street address P.O. Box 2040
City Rotterdam
ZIP/Postal code 3000CA
Country Netherlands
 
Platforms (1)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
Samples (42)
GSM1445962 G104: Prostate_Cancer
GSM1445963 G051: Prostate_Cancer
GSM1445964 G059: Prostate_Cancer
Relations
BioProject PRJNA256097

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE59745_RAW.tar 908.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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