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Series GSE60964 Query DataSets for GSE60964
Status Public on Sep 02, 2015
Title YB-1 affects response to paclitaxel in TNBCs by modulation of EGR1
Organism Homo sapiens
Experiment type Expression profiling by array
Summary For patients with triple negative breast tumours (TNBCs), lacking receptors for oestrogen, progesterone or HER2 on their cell surface, chemotherapy is the main treatment. The taxanes, paclitaxel (PTX) and docetaxel, have become the most commonly-used chemotherapies for these kinds of breast cancer. Although several targeted therapies are currently undergoing clinical trials for TNBC, because of the heterogeneous nature of TNBCs, it is predicted that these may often be used in combination with chemotherapy. Therefore an understanding of the mechanisms of chemotherapy resistance will continue to be important for the treatment of these patients.
 
Overall design Given the pleiotropic nature of YB-1, the aim of this study was to understand whether there were mechanisms in addition to those discussed above, by which YB-1 controls response to PTX in TNBCs. We initially followed up two previously studied mechanisms, mediated by ABCB1/MDR1 and DUSP4. We then proceeded to use genomics to identify novel mechanisms by which YB-1 regulates the response of TNBCs to PTX. This analysis identified and experimentally validated EGR1, encoding the early growth response protein 1 (EGR1) as a previously undiscovered mechanism of YB-1-driven PTX resistance.
 
Contributor(s) Fitzgerald S, Hurley DG, Mehta S, Ruza I, Shelling A, Sullivan R, Algie M, Woolley A, Braithwaite A, Print CG, Lasham A
Citation(s) 27072400
Submission date Sep 02, 2014
Last update date Aug 23, 2018
Contact name Daniel Glyn Hurley
E-mail(s) daniel.hurley@unimelb.edu.au
Organization name The University of Melbourne
Department Systems Biology Laboratory
Lab Systems Biology Laboratory
Street address Level 4, Bldg 193, EEE
City Melbourne
ZIP/Postal code 3010
Country Australia
 
Platforms (1)
GPL15207 [PrimeView] Affymetrix Human Gene Expression Array
Samples (15)
GSM1494619 YB-1_o/e + media control_rep1
GSM1494620 YB-1_o/e + media control_rep2
GSM1494621 YB-1_o/e + media control_rep3
Relations
BioProject PRJNA260001

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60964_RAW.tar 30.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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