GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE61236
Query DataSets for GSE61236
Status
Public on Feb 12, 2015
Title
Chromatin dynamics and gene regulation by GR
Organism
Mus musculus
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
25677181
Submission date
Sep 09, 2014
Last update date
May 15, 2019
Contact name
Songjoon Baek
Organization name
NCI / NIH
Department
CCR
Lab
LRBGE
Street address
41 Library Drive
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Platforms (1)
GPL9185
Illumina Genome Analyzer (Mus musculus)
Samples (37)
Less...
More...
GSM1499982
GR ChIP-Seq 0 min Cort
GSM1499983
GR ChIP-Seq 20 min Cort
GSM1499984
GR ChIP-Seq 60 min Cort Pulsed
GSM1499985
GR ChIP-Seq 60 min Cort Constant
GSM1499986
GR ChIP-Seq input 0 min Cort
GSM1499987
GR ChIP-Seq input 20 min Cort
GSM1499988
GR ChIP-Seq input 60 min Cort Pulsed
GSM1499989
GR ChIP-Seq input 60 min Cort Constant
GSM1499990
Pol II ChIP-Seq 0 min Cort
GSM1499991
Pol II ChIP-Seq 20 min Cort
GSM1499992
Pol II ChIP-Seq 60 min Cort Pulsed
GSM1499993
Pol II ChIP-Seq 60 min Cort Constant
GSM1499994
Pol II ChIP-Seq Mock 0 min Cort 1
GSM1499995
Pol II ChIP-Seq Mock 20 min Cort 1
GSM1499996
Pol II ChIP-Seq Mock 60 min Cort Pulsed 1
GSM1499997
Pol II ChIP-Seq Mock 60 min Cort Constant 1
GSM1499998
Pol II ChIP-Seq Mock 0 min Cort 2
GSM1499999
Pol II ChIP-Seq Mock 20 min Cort 2
GSM1500000
Pol II ChIP-Seq Mock 60 min Cort Pulsed 2
GSM1500001
Pol II ChIP-Seq Mock 60 min Cort Constant 2
GSM1500002
Input Pol II
GSM1500003
CTCF ChIP-Seq 0 min Cort
GSM1500004
DNase-Seq 0 min Cort
GSM1500005
DNase-Seq 20 min Cort
GSM1500006
DNase-Seq 60 min Cort Pulsed
GSM1500007
DNase-60 min Cort Constant
GSM1500008
Mock DNase-Seq 0 min Cort
GSM1500009
Mock DNase-Seq 20 min Cort
GSM1500010
Mock DNase-Seq 60 min Cort Pulsed
GSM1500011
Mock DNase-seq 60 min Cort Constant
GSM1611789
p300 ChIP-Seq No Dex
GSM1611790
p300 ChIP-Seq 60m Dex
GSM1611791
Brg1 ChIP-Seq No Dex
GSM1614716
DNase-Seq 0 min Cort Sample 2
GSM1614717
DNase-Seq 20 min Cort Sample 2
GSM1614718
DNase-Seq 60 min Cort Pulsed Sample2
GSM1614719
DNase-Seq 60 min Cort Constant Sample2
This SuperSeries is composed of the following SubSeries:
GSE61234
GR and Pol II interactions with regulatory elements in response to ultradian (pulsed) hormone stimulation [ChIP-seq]
GSE61235
Changes in DNaseI hypersensitivity upon ultradian (pulsed) hormone stimulation [Dnase-seq]
Relations
BioProject
PRJNA260569
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE61236_RAW.tar
2.4 Gb
(http)
(custom)
TAR (of BEDGRAPH, CSV)
SRA Run Selector
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|