NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE63116 Query DataSets for GSE63116
Status Public on May 28, 2015
Title H3K9me3 ChIP-seq in HeLa cells lacking TASOR, MPP8, periphilin and SETDB1
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We performed ChIP-seq to measure H3K9me3 levels in wild-type HeLa cells and HeLa cells lacking TASOR, MPP8, periphilin and SETDB1 generated through CRISPR/Cas9-mediated gene disruption.
 
Overall design H3K9me3 ChIP-seq using the Abcam antibody ab8898
 
Contributor(s) Tchasovnikarova IA, Timms RT, Lehner PJ
Citation(s) 26022416
Submission date Nov 07, 2014
Last update date May 15, 2019
Contact name Iva Tchasovnikarova
E-mail(s) it257@cam.ac.uk
Organization name University of Cambridge
Department The Gurdon Institute
Lab Tchasovnikarova Lab
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (5)
GSM1541548 H3K9me3_WT
GSM1541549 H3K9me3_sgTASOR
GSM1541550 H3K9me3_sgMPP8
Relations
BioProject PRJNA266653
SRA SRP049625

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE63116_HeLa_H3K9me3_windowScores.txt.gz 1.9 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap