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| Status |
Public on Nov 21, 2014 |
| Title |
Dysregulation of microRNAs in neurodegeneration |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
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| Summary |
This dataset contains small RNA-seq data from six Alzheimer disease, three tangle-predominant dementia and seven control brains.
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| Overall design |
Total RNA was isolated from human post-mortem autopsy brain and small RNA-seq was performed as described [Hafner, M., Renwick, N., Brown, M., Mihailovic, A., Holoch, D., Lin, C., Pena, J.T., Nusbaum, J.D., Morozov, P., Ludwig, J., et al. RNA-ligase-dependent biases in miRNA representation in deep-sequenced small RNA cDNA libraries. RNA. 2011; 17(9):1697-1712]
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| Contributor(s) |
Santa-Maria I, Renwick N, Tuschl T, Crary J |
| Citation(s) |
25574843 |
| Submission date |
Nov 20, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Ismael Santa Maria |
| E-mail(s) |
is2395@columbia.edu
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| Phone |
212-305-6371
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| Organization name |
Columbia University
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| Department |
Pathology & Cell Biology
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| Lab |
15-401
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| Street address |
630W 168TH STREET
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| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10032 |
| Country |
USA |
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| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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| Samples (16)
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| Relations |
| BioProject |
PRJNA268092 |
| SRA |
SRP050084 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE63501_RAW.tar |
141.6 Mb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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