|
| Status |
Public on Apr 24, 2015 |
| Title |
Onchocerca-derived small RNAs in host nodules and serum |
| Organisms |
Homo sapiens; Bos taurus |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
We report the presence of Onchocerca ochengi and O. volvulus derived small RNAs in bovine nodule fluids and human serum and plasma, respectively. Further comparisons with other related filarial nematodes like Litomosoides sigmodontis and Dirofilaria immitis reveal common and distictive signatures associated to the Onchocerca species.
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| |
|
| Overall design |
Examination of small RNA content in bovine nodule fluids and human serum/plasma by Next Generation sequencing
|
| |
|
| Contributor(s) |
Quintana JF, Makepeace BL, Babayan S, Ivens AC, Pfarr K, Blaxter M, Debrah A, Wanji S, Ngangyung HF, Bah GS, Tanya VN, Taylor DW, Hoerauf A, Buck AH |
| Citation(s) |
25623184 |
| Submission date |
Dec 06, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Alasdair Ivens |
| E-mail(s) |
al.ivens@ed.ac.uk
|
| Phone |
44 131 6513605
|
| Organization name |
Centre for Immunity, Infection and Evolution
|
| Street address |
Kings Buildings
|
| City |
Edinburgh |
| ZIP/Postal code |
EH9 3FL |
| Country |
United Kingdom |
| |
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| Platforms (2) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
| GPL19172 |
Illumina HiSeq 2500 (Bos taurus) |
|
| Samples (5)
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|
| Relations |
| BioProject |
PRJNA269539 |
| SRA |
SRP050878 |
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