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Series GSE64248 Query DataSets for GSE64248
Status Public on Jul 02, 2015
Title Quantification of regenerative potential in primary human mammary epithelial cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We present an organoid regeneration assay in which freshly dissociated human mammary epithelial cells from healthy donors are grown in adherent/rigid or floating/compliant collagen I gels. In both conditions, luminal progenitors (CD49f+EpCAM+) form spheres, whereas basal cells (CD49fhiEpCAM-) generate branched ductal structures. However, in compliant but not rigid collagen gels, branching ducts form alveoli at their tips, express basal and luminal markers at correct positions and display contractility, which is required for alveologenesis. Thereby, branched structures generated in compliant collagen gels resemble terminal ductal-lobular units (TDLUs), the functional units of the mammary gland.
Moreover, the membrane metallo-endopeptidase CD10 as an additional surface marker enriches for TDLU-formation and reveals the presence of stromal cells within the CD49fhiEpCAM- population. In summary, we describe a defined in vitro assay system to quantify cells with regenerative potential and systematically investigate their interaction with the physical environment at distinct steps of morphogenesis.
 
Overall design Comparison of three cell populations derived from FACS-sorted primary human mammary epithelial cells: luminal progenitors, CD10+ basal cells and CD10- basal cells.
 
Contributor(s) Linnemann JR, Miura H, Meixner LK, Irmler M, Kloos UJ, Hirschi B, Bartsch HS, Sass S, Beckers J, Theis F, Gabka C, Sotlar K, Scheel CH
Citation(s) 26071498
Submission date Dec 16, 2014
Last update date Mar 15, 2019
Contact name Johannes Beckers
E-mail(s) johannes.beckers@helmholtz-munich.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platforms (1)
GPL16686 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [transcript (gene) version]
Samples (18)
GSM1567028 Luminal_progenitor_rep1
GSM1567029 Luminal_progenitor_rep2
GSM1567030 Luminal_progenitor_rep3
Relations
BioProject PRJNA270533

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Supplementary file Size Download File type/resource
GSE64248_RAW.tar 143.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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