|
| Status |
Public on Apr 30, 2007 |
| Title |
SYT-SSX murine synovial sarcoma model |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
|
| Summary |
The human SYT-SSX fusion protein was expressed in a developmentally dependent fashion in murine myoblasts. Tumors harvested from mice in adolescence were compared to normal mouse skeletal muscle samples.
Keywords: tumor versus normal muscle tissue
|
| |
|
| Overall design |
Murine tumors were excised from affected mice for RNA extraction and hybridization on Affymetrix microarrays. For control samples normal mouse skeletal muscle tissue was obtained and RNA extracted for hybridization to the Affymetrix arrays.
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| |
|
| Contributor(s) |
Halder M, Hancock J, Coffin C, Lessnick S, Capecchi M |
| Citation(s) |
17418413 |
| Submission date |
Dec 06, 2006 |
| Last update date |
Feb 11, 2019 |
| Contact name |
Jeffrey Hancock |
| E-mail(s) |
jhancock@hsc.utah.edu
|
| Organization name |
University of Utah
|
| Department |
Huntsman Cancer Institute
|
| Lab |
Lessnick Lab
|
| Street address |
2000 Circle of Hope Dr
|
| City |
Salt Lake City |
| State/province |
UT |
| ZIP/Postal code |
84112 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL1261 |
[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array |
|
| Samples (9)
|
| GSM148507 |
Wild Type Skeletal Muscle Sample (Hind limb) |
| GSM148508 |
Wild Type Skeletal Muscle Sample (Intercostal) |
| GSM148509 |
Wild Type Skeletal Muscle Sample (forelimb) |
| GSM148510 |
Wild Type Skeletal Muscle Sample (Hind limb 2) |
| GSM148511 |
Tumor from MYF-5 CRE/SSM2 mouse CC23 |
| GSM148512 |
Tumor from MYF-5 CRE/SSM2 mouse CC17-B |
| GSM148513 |
Tumor from MYF-5 CRE/SSM2 mouse CC17-A |
| GSM148514 |
Tumor from MYF-5 CRE/SSM2 mouse SSM5 |
| GSM148515 |
Tumor from MYF-5 CRE/SSM2 mouse SSM4 |
|
| Relations |
| BioProject |
PRJNA98691 |
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