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| Status |
Public on Sep 29, 2016 |
| Title |
The linker histone H1.0 generates epigenetic and functional intratumor heterogeneity |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
Identification of H1.0 genome wide distribution in in-vitro transformed fibroblast before its silencing in tumor CSCs and the localization of the histone modifications H3K27me3 and H3K4me3.
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| Overall design |
ChIP-seq of H1.0, H1.4, H3K4me3 and H3K27me3 in in vitro-transformed human skin fibroblasts. Two biological replicates each were analyzed.
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| Contributor(s) |
Morales Torres C, Biran A, Burney MJ, Patel H, Henser-Brownhill T, Shapira Cohen A, Li Y, Ben Hamo R, Nye E, Spencer-Dene B, Chakravarty P, Efroni S, Matthews N, Misteli T, Meshorer E, Scaffidi P |
| Citation(s) |
27708074 |
| Submission date |
Feb 20, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Eran Meshorer |
| E-mail(s) |
meshorer@huji.ac.il
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| Organization name |
The Hebrew University of Jerusalem
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| Department |
Genetics
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| Street address |
Edmond J. Safra Campus
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| City |
Jerusalem |
| ZIP/Postal code |
91904 |
| Country |
Israel |
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| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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| Samples (10)
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| Relations |
| BioProject |
PRJNA276007 |
| SRA |
SRP055388 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE66169_RAW.tar |
5.2 Mb |
(http)(custom) |
TAR (of BED) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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