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Series GSE66321 Query DataSets for GSE66321
Status Public on Feb 01, 2016
Title Gene expression changes reflect clinical response in a placebo-controlled randomized trial of abatacept in patients with diffuse cutaneous systemic sclerosis
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Systemic sclerosis (SSc) is an autoimmune disease characterized by inflammation and fibrosis of the skin and internal organs. We sought to assess the clinical and molecular effects associated with response to intravenous abatacept in patients with diffuse cutaneous systemic sclerosis (dcSSc).
 
Overall design Adult dcSSc patients were randomized in a 2:1 double-blinded fashion to receive abatacept or placebo over 24 weeks. Primary outcomes were safety and the change in modified Rodnan Skin Score (mRSS) at week 24 compared with baseline. Improvers were defined as patients with a decrease in mRSS of ≥30% post-treatment compared to baseline. Skin biopsies were obtained for differential gene expression and pathway enrichment analyses and intrinsic gene expression subset assignment.
 
Contributor(s) Chakravarty EF, Haddon DJ, Whitfield ML, Martyanov V, Jarrell JA, Chung L, Fiorentino D, Utz PJ
Citation(s) 26071192
Submission date Feb 26, 2015
Last update date Oct 11, 2016
Contact name Tammara Wood
E-mail(s) tammara.a.wood@dartmouth.edu
Organization name Dartmouth Medical School
Department Biomedical Data Science
Lab Whitfield Lab
Street address WTRB 674
City Lebanon
State/province NH
ZIP/Postal code 03756
Country USA
 
Platforms (1)
GPL14550 Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Probe Name Version)
Samples (16)
GSM1619594 190_Imp1
GSM1619595 198_Imp2
GSM1619596 425_Imp3
Relations
BioProject PRJNA276562

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE66321_RAW.tar 346.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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