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Series GSE67177 Query DataSets for GSE67177
Status Public on Jun 19, 2015
Title Survival rate and transcriptional response upon infection with the generalist parasite Beauveria bassiana in a world-wide sample of Drosophila melanogaster
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary The ability to cope with infection by a parasite is one of the major challenges for any host species and is a major driver of evolution. Parasite pressure differs between habitats. It is thought to be higher in tropical regions compared to temporal ones. We infected Drosophila melanogaster from two tropical (Malaysia and Zimbabwe) and two temperate populations (the Netherlands and North Carolina) with the generalist entomopathogenic fungus Beauveria bassiana to examine if adaptation to local parasite pressures led to differences in resistance. Contrary to previous findings we observed increased survival in temperate populations. This, however, is not due to increased resistance to infection per se, but rather the consequence of a higher general vigor of the temperate populations. We also assessed transcriptional response to infection within these flies eight and 24 hours after infection. Only few genes were induced at the earlier time point, most of which are involved in detoxification. In contrast, we identified more than 4,000 genes that changed their expression state after 24 hours. This response was generally conserved over all populations with only few genes being uniquely regulated in the temperate populations. We furthermore found that the American population was transcriptionally highly diverged from all other populations concerning basal levels of gene expression. This was particularly true for stress and immune response genes, which might be the genetic basis for their elevated vigor.
 
Overall design mRNA profiles of whole Drosophila melanogaster adult males from an African, American, Asian and European population after infection with Beauveria bassiana. Samples include uninfected controls, 8h after infection and 24h after infection. 3 biological replicates each (2 in the case of American controls).
 
Contributor(s) Paparazzo F, Tellier A, Stephan W, Hutter S
Citation(s) 26154519
Submission date Mar 23, 2015
Last update date May 15, 2019
Contact name Stephan Hutter
Organization name University of Munich
Department Department of Biology II
Lab Section of Evolutionary Biology
Street address Grosshaderner Strasse 2
City Planegg-Martinsried
State/province Bavaria
ZIP/Postal code 82152
Country Germany
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (35)
GSM1641218 Af_C_1
GSM1641219 Af_C_2
GSM1641220 Af_C_3
Relations
BioProject PRJNA279177
SRA SRP056436

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Supplementary file Size Download File type/resource
GSE67177_RAW.tar 2.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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