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Series GSE67273 Query DataSets for GSE67273
Status Public on Dec 27, 2019
Title Genome-wide maps of chromatin state in immune cells derived from IBD patients
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We generated genome-wide chromatin-state maps of immune cells purified from LPMC of IBD and non-IBD patients by using next generation sequencing.
 
Overall design Examination of 3 different histone modifications in 2 cell types.
 
Contributor(s) Otsubo T, Oshima K, Hattori M, Dohi T, Kawamura YI
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Mar 25, 2015
Last update date Dec 28, 2019
Contact name noriko nishi
Organization name Axiohelix Co. Ltd.
Street address 5-11 hakozaki 5F Yunibasaru Bldg
City tyuo-ku
State/province Tokyo
ZIP/Postal code 103-0015
Country Japan
 
Platforms (2)
GPL13393 AB SOLiD 4 System (Homo sapiens)
GPL16558 AB 5500 Genetic Analyzer (Homo sapiens)
Samples (34)
GSM1643535 input_CD3_N1
GSM1643536 input_CD3_N2
GSM1643537 input_CD3_U1
Relations
BioProject PRJNA280006
SRA SRP056753

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE67273_RAW.tar 1.6 Gb (http)(custom) TAR (of BED, WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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