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Series GSE67720 Query DataSets for GSE67720
Status Public on Oct 10, 2015
Title Characterization of chemokine and chemokine receptor expression during Pneumocystis infection in healthy and immunodeficient mice (part 2)
Organism Mus musculus
Experiment type Expression profiling by array
Summary In wild-type mice, expression of chemokines that are ligands for Ccr2, Cxcr3, and Cxcr2 increased at days 32 to 41 post-infection, with a return to baseline by day 75. Concomitant increases were seen in Ccr2 and Cxcr3 but not in Cxcr2 expression. Induction of these same factors also occurred in CD40-ligand and CD40 knockout mice but only at a much later time-point, during uncontrolled Pneumocystis pneumonia (PCP). Expression of CD4 Th1 markers was increased in wild-type mice during clearance of infection. Ccr2 and Cx3cr1 knockout mice cleared Pneumocystis infection with kinetics similar to wild-type mice, and all animals developed anti-Pneumocystis antibodies. Upregulation of Ccr2 and Cxcr3 and their ligands supports an important role for T helper cells and mononuclear phagocytes in the clearance of Pneumocystis infection. However, based on the current and prior studies, no single chemokine receptor appears to be critical to the clearance of Pneumocystis.
 
Overall design Gene expression microarrays were from 2 controls (CD40L-KO(+/-)) non exposure compared with 3 controls 5 months exposure and were from 3 CD40L-KO(-/-) non exposure compared with 4 CD40L-KO 5 months exposure
 
Contributor(s) Bishop LR, Lionakis MS, Sassi M, Murphy PM, Hu X, Huang DW, Sherman B, Yang J, Lempicki RA, Kovacs JA
Citation(s) 26052064
Submission date Apr 09, 2015
Last update date Mar 06, 2018
Contact name Xiaojun Hu
Organization name SAIC_Frederick, INc
Department CSP
Lab LIB
Street address 1050 Boyles St.
City Frederick
State/province MD
ZIP/Postal code 21702
Country USA
 
Platforms (1)
GPL6096 [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [transcript (gene) version]
Samples (12)
GSM1654782 G109_-/-_no
GSM1654783 G110_+/-_no
GSM1654784 G111_-/-_no
This SubSeries is part of SuperSeries:
GSE67721 Characterization of chemokine and chemokine receptor expression during Pneumocystis infection in healthy and immunodeficient mice
Relations
BioProject PRJNA280753

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE67720_RAW.tar 455.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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