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Series GSE67960 Query DataSets for GSE67960
Status Public on Apr 29, 2015
Title The kinase DYRK1A reciprocally regulates the differentiation of Th17 and regulatory T cells [seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Using an unbiased chemical biology approach, we discover harmine as a novel regulator of Treg/Th17 differentiation. Harmine enhances Treg differentiation (working in conjunction with low levels of exogenous TGFb) and inhibits Th17 differentiation. Analysis of global gene expression of Tregs generated using low TGFb + harmine reveals significant similarity to Tregs generated using high TGFb only and suggests relevance of harmine-engaged mechanisms to IBD.
 
Overall design Naïve murine CD4+CD62L+ T cells were stimulated with anti-CD3/28, transduced with control or Dyrk1a shRNA, and treated with harmine or control.
 
Contributor(s) Khor B, Goel G, Schirmer M, Xavier RJ
Citation(s) 25998054
Submission date Apr 16, 2015
Last update date May 15, 2019
Contact name Bernard Khor
E-mail(s) bkhor@partners.org
Organization name Massachusetts General Hospital
Department Pathology
Lab Xavier
Street address 185 Cambridge St MCPZN 7106
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
 
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (6)
GSM1659675 Scrmblr rep1
GSM1659676 Scrmblr_Harmine rep1
GSM1659677 Dyrk1a_shRNA rep1
This SubSeries is part of SuperSeries:
GSE67961 The kinase DYRK1A reciprocally regulates the differentiation of Th17 and regulatory T cells
Relations
BioProject PRJNA281380
SRA SRP057264

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE67960_rsem.genes.counts.matrix.gz 291.1 Kb (ftp)(http) MATRIX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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