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Series GSE68416 Query DataSets for GSE68416
Status Public on Dec 31, 2015
Title BMAL1 Activates Clock Gene Expression by Regulating Transcription Initiation
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary We showed that Bmal1 mainly regulates clock gene initiation, with this functioning being highly conserved across species.
 
Overall design compare RNA-seq and chip-seq between wildtype and mutant cells
 
Contributor(s) Wei X
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 29, 2015
Last update date May 15, 2019
Contact name xiong will wei
E-mail(s) xiongwei@nibs.ac.cn
Organization name NIBS,Beijing
Street address 7 Science Park Road ZGC Life Science Park
City Beijing
ZIP/Postal code 102206
Country China
 
Platforms (3)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (27)
GSM1671323 BM-H3K27ac Chip-seq
GSM1671324 BM-H3K4me3 Chip-seq
GSM1671325 BM-POL2 Chip-seq
Relations
BioProject PRJNA282679
SRA SRP057814

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE68416_RAW.tar 929.6 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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