|
| Status |
Public on May 25, 2016 |
| Title |
The lncRNA LUST promotes CCICs self-renewal stimulating the wnt/b-catenin signaling activation [RNA-Seq] |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Comprehensive RNA-seq experiments in CD24bright/CD44bright (CCICs), CD24dim/CD44dim (more differentiated counterpart) cells and colonospheres delineate the role of the lncRNA LUST in promoting CCICs self-renewal.
|
| |
|
| Overall design |
RNA-Seq study from HT-29 CD44bright/CD24bright and CD24dim/CD44dim sorted cells subpopulation
|
| |
|
| Contributor(s) |
Di Cecilia S, Zhang F, Zhang W, Walsh M |
| Citation(s) |
27520449 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R01 HL103967 |
Chromatin Dynamics of the CFTR locus |
MOUNT SINAI SCHOOL OF MEDICINE |
Walsh |
| R01 CA154809 |
Non-coding RNAs for Epigenetic Transcriptional Silencing in Prostate Cancer |
MOUNT SINAI SCHOOL OF MEDICINE |
Walsh |
|
| Submission date |
May 26, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Martin J. Walsh |
| E-mail(s) |
martin.walsh@mssm.edu
|
| Organization name |
Mount Sinai School of Medicine
|
| Department |
Structural and Chemical Biology
|
| Street address |
One Gustave L. Levy Pl.
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10029 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9052 |
Illumina Genome Analyzer (Homo sapiens) |
|
| Samples (3) |
|
| This SubSeries is part of SuperSeries: |
| GSE69236 |
The lncRNA LUST promotes CCICs self-renewal stimulating the wnt/b-catenin signaling activation |
|
| Relations |
| BioProject |
PRJNA284941 |
| SRA |
SRP058717 |
