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Series GSE69988 Query DataSets for GSE69988
Status Public on May 22, 2019
Title Modeling CMT1A with human induced pluripotent stem cell derived Schwann cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We obtained skin fibroblasts from CMT1A and control patients, and generated hiPSCs which were subsequently differentiated into cd49d+ human Schwann cells. We utilized microarray technology to explore the gene expression profiles of cd49d+ Schwann cells CMT1A hiPSCs, control hiPSCs, and control human embryonic stem cells in order to identify potentially disregulated pathways contributing to CMT1A pathogenesis.
Patient-specific human induced pluripotent stem cells (hiPSCs) hold great promise for disease modeling of genetic disorders. Often the findings from hiPSC-based studies are validated with genetically-corrected hiPSCs generated by precise genome editing technologies, however, alternatives that have not yet been employed are validation with embryonic stem cells harboring the same disease mutation or utilizing another reprogramming approach from somatic cells of same patients. Here we report that disease-relevant phenotypes found in Charcot-Marie-Tooth 1A (CMT1A)-hiPSC-derived Schwann cells were further confirmed by two additional congruent CMT1A models as an alternative to gene correction. We have devised a defined and relatively fast protocol for the direct derivation and prospective isolation of Schwann cells from hiPSCs, leading us to uncover a phenotype of dysregulated immune signaling in CMT1A-hiPSCs-Schwann cells. Our study illustrates the promise of applying hiPSC technology to one of the most common hereditary neuropathies for gaining new insights into human disease pathogenesis and treatment, and these results demonstrate the feasibility of verifying disease phenotypes by utilizing the malleability of cellular fates.
 
Overall design hiPSC-Schwann cells from one CMT1A patient (3 samples), an unrelated patient (1 sample), a control hiPSC line (2 samples) and a control hESC line (2 samples) were analyzed using the Affy Primeview array
 
Contributor(s) Mukherjee-Clavin B, Lee G
Citation(s) 30962586
Submission date Jun 18, 2015
Last update date Aug 21, 2019
Contact name Gabsang Lee
E-mail(s) glee48@jhmi.edu
Phone 443-287-8631
Organization name The Johns Hopkins University
Department School of Medicine
Lab Institute for Cell Engineering
Street address 733 North Broadway
City Baltimore
State/province MD
ZIP/Postal code 21205
Country USA
 
Platforms (1)
GPL15207 [PrimeView] Affymetrix Human Gene Expression Array
Samples (8)
GSM1715401 CMT1A hiPSC 5148 Schwann cells - biological repeat 1
GSM1715402 CMT1A hiPSC 5148 Schwann cells - biological repeat 2
GSM1715403 CMT1A hiPSC 5148 Schwann cells - biological repeat 3
Relations
BioProject PRJNA287351

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE69988_RAW.tar 16.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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