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Series GSE70200 Query DataSets for GSE70200
Status Public on Jul 14, 2015
Title Engagement of the Aryl Hydrocarbon Receptor in Mycobacterium tuberculosis–Infected Macrophages Has Pleiotropic Effects on Innate Immune Signaling
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Understanding the mechanisms of host macrophage responses to Mycobacterium tuberculosis (M.tb.) is essential for uncovering potential avenues of intervention to boost host resistance to infection. Macrophage transcriptome profiling revealed M.tb. infection strongly induced expression of several enzymes controlling tryptophan (Trp) catabolism. This included indole 2,3-dioxygenase 1 (IDO1) and tryptophan 2,3-dioxygenase (TDO2), which catalyze the rate-limiting step in the kynurenine pathway, producing ligands for the aryl hydrocarbon receptor (AHR). The AHR and heterodimeric partners AHR nuclear translocator (ARNT) and RELB are robustly expressed, and AHR and RELB levels further increased during infection. Infection enhanced AHR/ARNT and AHR/RELB DNA binding, and stimulated expression of AHR target genes, including that encoding the inflammatory cytokine IL1beta. AHR target gene expression was further enhanced by exogenous kynurenine, and exogenous Trp, kynurenine or synthetic agonist indirubin reduced mycobacterial viability. Comparative expression profiling revealed that AHR ablation diminished expression of numerous genes implicated in innate immune responses, including several cytokines. Notably, AHR depletion reduced expression of IL23A and IL12B transcripts, which encode subunits of interleukin 23 (IL23), a macrophage cytokine that stimulates production of IL22 by innate lymphoid cells. The AHR directly induced IL23A transcription in human and mouse macrophages through near-upstream enhancer regions. Taken together, these findings show that AHR signaling is strongly engaged in Mtb-infected macrophages, and has widespread effects on innate immune responses. Moreover, they reveal a cascade of AHR-driven innate immune signaling, as IL1B (IL-1β) and IL23 stimulate T cell subsets producing IL22, another direct target of AHR transactivation.
 
Overall design Gene expression profiling of Mycobacterium tuberculosis Infected THP-1 monocytic cells following siRNA-mediated Aryl hydrocarbon receptor (AHR) knockdown.
 
Contributor(s) Memari B, Bouttier M, Dimitrov V, Ouellette M, Behr MA, Fritz JH, White JH
Citation(s) 26416282
Submission date Jun 23, 2015
Last update date Mar 15, 2019
Contact name John H White
Phone 5143988498
Organization name McGill University
Department Physiology
Lab John White
Street address Room 1109, McIntyre Medical Buiding, 3655 Prom Sir William Osler
City Montreal
State/province Quebec
ZIP/Postal code H3G1Y6
Country Canada
 
Platforms (1)
GPL16686 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [transcript (gene) version]
Samples (8)
GSM1720714 AHR KNOCKDOWN BY AHR siRNA_A1
GSM1720715 AHR KNOCKDOWN BY AHR siRNA_A2
GSM1720716 AHR KNOCKDOWN BY AHR siRNA_A3
Relations
BioProject PRJNA287831

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Supplementary file Size Download File type/resource
GSE70200_AllGenes.xlsx 7.6 Mb (ftp)(http) XLSX
GSE70200_RAW.tar 63.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
Processed data are available on Series record

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