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Series GSE70576 Query DataSets for GSE70576
Status Public on Jul 08, 2015
Title EAG2 potassium channel with evolutionarily conserved function as a brain tumor target
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Characterizing the impact of pharmacological and shRNA-mediated silencing of EAG2 in medulloblastoma.
Medulloblastoma (MB) is the most common pediatric CNS malignancy. Previously, we demonstrated that overexpression of the ion channel EAG2, identified in a subset of histological and molecular subtypes of this disease, functionally contributes to tumor progression (PMID: 22855790). Here, we demonstrate the evolutionarily conserved function of EAG2 potassium channel in promoting brain tumor growth and metastasis, delineate downstream pathways and uncover a co-option mechanism for different potassium channels to regulate mitotic cell volume and tumor progression. We show that EAG2 potassium channel is enriched at the trailing edge of migrating MB cells to regulate local cell volume dynamics, thereby facilitating cell motility. We identify the FDA- approved antipsychotic drug thioridazine as an EAG2 channel blocker that reduces xenografted MB growth and metastasis, and present a case report of repurposing thioridazine for treating a human patient. Our findings thus illustrate the potential of targeting ion channels in cancer treatment.
 
Overall design The goal of this analysis was to determine the transcriptional consequences of pharmacological (i.e. astemizole) or shRNA-mediated inhibition/suppression of EAG2 in low passage medulloblastoma cell lines. This analysis was performed in an effort to characterize evolutionarily conserved role of EAG2 in mediating tumor growth and metastasis. Pathway analysis was subsequently performed and compared to results obtained in a Drosophila model.
 
Contributor(s) Huang X, Dubuc A
Citation(s) 26258683
Submission date Jul 07, 2015
Last update date Mar 15, 2019
Contact name Adrian Dubuc
E-mail(s) adubuc@bwh.harvard.edu
Organization name Brigham and Women's Hospital
Street address 75 Francis St, 5-5066 Shapiro Building
City Boston
State/province Massachussetts
ZIP/Postal code 01760
Country USA
 
Platforms (1)
GPL16686 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [transcript (gene) version]
Samples (12)
GSM1810482 shRNA-inibited EAG2, replicate 1
GSM1810485 shRNA-inibited EAG2, replicate 2
GSM1810487 shRNA-inibited EAG2, replicate 3
Relations
BioProject PRJNA289065

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE70576_RAW.tar 104.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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