|
| Status |
Public on Jan 01, 2016 |
| Title |
ChIP-seq of circadian transcription factors in MLL-AF9 leukemia cell lines |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We performed ChIP-seq of two core circadian TFs which were found to be important in leukemia proliferation, in order to identify potential target genes regulated by the circadian rhythm.
|
| |
|
| Overall design |
Here, we performed ChIP-seq for the core circadian transcription factors CLOCK and ARNTL (BMAL1) in NOMO-1 and THP-1 cells.
|
| |
|
| Contributor(s) |
de Boer CG, Kowalczyk M, Puram R |
| Citation(s) |
27058663 |
| Submission date |
Jul 09, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Carl G de Boer |
| Organization name |
The Broad Institute
|
| Lab |
Aviv Regev
|
| Street address |
415 Main St
|
| City |
Cambridge |
| State/province |
MA |
| ZIP/Postal code |
02139 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL15520 |
Illumina MiSeq (Homo sapiens) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (22)
|
|
| Relations |
| BioProject |
PRJNA289353 |
| SRA |
SRP060606 |
Less...
More...