|
| Status |
Public on Feb 29, 2016 |
| Title |
Differentially Expressed Pseudogenes in HIV-1 Infection |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We analyzed transcriptomic data from infected and uninfected T-cells to identify pseudogenes and their parent genes showing differential expression in HIV-1 infection
|
| |
|
| Overall design |
H9 T-cell line was infected with NL4-3 strain of HIV-1 obtained by transfection of 293T cells. RNA from infected and uninfected cells was extracted 7 days post infection.
|
| |
|
| Contributor(s) |
Gupta A, Adami C |
| Citation(s) |
26426037 |
| Submission date |
Jul 10, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Aditi Gupta |
| E-mail(s) |
aditi9783@gmail.com
|
| Organization name |
Rutgers University
|
| Department |
Medicine
|
| Street address |
185 South Orange Ave, MSB-A920G
|
| City |
Newark |
| State/province |
NEW JERSEY |
| ZIP/Postal code |
07103 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (2) |
|
| Relations |
| BioProject |
PRJNA289529 |
| SRA |
SRP060668 |
