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Series GSE70959 Query DataSets for GSE70959
Status Public on Jul 15, 2016
Title Transcriptome analysis of SF3B1-mutation induced changes in K562 cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Using RNA-Seq, we determined changes to gene expression and splicing on inducible expression of SF3B1-WT and SF3B1-MUT (K700E) in K562 cells.
 
Overall design Using RNA-Seq, we determined changes to gene expression and splicing on inducible expression of SF3B1-WT and SF3B1-MUT (K700E) in K562 cells.
 
Contributor(s) Kesarwani A, Pillai MM
Citation(s) 27524419
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 HL104070 Role of microRNAs in regulation of the marrow microenvironment YALE UNIVERSITY Manoj M. Pillai
R01 HL098608 Cyclin E Regulation in Normal and Neoplastic Hematopoiesis BloodCenter of Wisconsin Alexander C Minella
Submission date Jul 15, 2015
Last update date May 15, 2019
Contact name MANOJ PILLAI
E-mail(s) MANOJ.PILLAI@YALE.EDU
Organization name YALE UNIVERSITY
Lab PILLAI LAB
Street address 300 GEORGE STREET #786
City NEW HAVEN
State/province CT
ZIP/Postal code 06511
Country USA
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (8)
GSM1824078 MP1_K562_MUT+_1
GSM1824079 MP2_K562_MUT-_1
GSM1824080 MP3_K562_WT+_1
Relations
BioProject PRJNA290019
SRA SRP061203

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE70959_RAW.tar 64.4 Mb (http)(custom) TAR (of GTF)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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